@pipeworx/ncbi-eutils

Connect: https://gateway.pipeworx.io/ncbi-eutils/mcp · Install: one-click buttons

Tools: 6

NCBI E-utilities MCP — federated search and fetch across all NCBI Entrez databases: PubMed, Gene, Nucleotide, Protein, Taxonomy, ClinVar, dbSNP, OMIM, BioProject, BioSample, SRA, … Keyless (3 req/s without key).

Tools

  • einfo(db?) — database info / field list
  • esearch(db, term, retmax?, retstart?, sort?) — search → uid list
  • esummary(db, ids, retstart?) — summary records by uid
  • efetch(db, ids, rettype?, retmode?) — full records
  • elink(dbfrom, dbto, ids, linkname?) — links across databases
  • egquery(term) — global query across all databases

Data source

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/

Tools

  • einfo — Database info / field list.
  • esearch — Search a database → uid list.
  • esummary — Summary records by uid.
  • efetch — Full records. Returns text (XML/GenBank/FASTA/…) per rettype.
  • elink — Links across databases.
  • egquery — Global query across all Entrez databases.

Tools

  • efetch — Full records. Returns text (XML/GenBank/FASTA/…) per rettype.
  • egquery — Global query across all Entrez databases.
  • einfo — Database info / field list.
  • elink — Links across databases.
  • esearch — Search a database → uid list.
  • esummary — Summary records by uid.

Regenerated from source · build May 21, 2026